ZHOU PUBLICATIONS

2020

  1. Orr, M. C.*, R. R. Ferrari, A. C. Hughes, J. Chen, J. S. Ascher, Y. Yan, P. H. Williams, X. Zhou, M. Bai, A. Rudoy, F. Zhang, K.-P. Ma, C.-D. Zhu*. 2020. Taxonomy must engage with new technologies and evolve to face future challenges. Nature Ecology and EvolutionIn press.

  2. Paulia, T.*, K. Meusemann, S. Kukowka, M. Sann, A. Donath, C. Mayer, J. P. Oeyen, Y. Ballesteros, A. Berg, E. van den Berghe, H. Escalona, A. Guglielmino, M. Niehuis, M. Olmi, L. Podsiadlowski, C. Polidori, J. de Rondj, P. Rosa, T. Schmitt, F. Strumia, M. Wurdack,l, S. Liu, X. Zhou, B. Misof, R. S. Peters, and O. Niehuis*. 2020. Analysis of RNA-seq, DNA target enrichment, and Sanger nucleotide sequences resolves deep splits in the phylogeny of cuckoo wasps (Hymenoptera: Chrysididae). Insect Systematics and Diversity. In press.

  3. Szucsich, N. U. *, D. Bartel, A. Blanke, A. Böhm, A. Donath, M. Fukui, S. Grove, S. Liu, O. Macek, R. Machida, B. Misof, Y. Nakagaki, L. Podsiadlowski, K. Sekiya, S. Tomizuka, B. von Reumont, R. Waterhouse, M. Walzl, G. Meng, X. Zhou, G. Pass, and K. Meusemann*. 2020. Four myriapod relatives – but who are sisters? No end to debates on relationships among the four major myriapod subgroups. BMC Evolutionary Biology. In press.

  4. Song*, S., O. Béthoux, S. Shin, A. Donath, H. Letsch, S. Liu, D. McKenna, G. Meng, K. Meusemann, B. Misof, L. Podsiadlowski, X. Zhou, B. Wipfler, and S. Simon*. 2020. Phylogenomic analysis sheds light on the evolutionary pathways towards acoustic communication in Orthoptera. Nature Communications 11: 4939. PDF
    Nature Blog: behind the story

  5. Schoville, S.*, S. Simon, M. Bai, Z. Beethem, R. Dudko, M. Eberhard, P. Frandsen, S. Küpper, R. Machida, M. Verheij, P. Willadsen, X. Zhou, and B. Wipfler. 2020. Comparative transcriptomics of ice-crawlers demonstrates cold specialization constrains niche evolution in a relict lineage. Evolutionary Applications. PDF

  6. Hao, M.#, Q. Jin#, G. Meng#, C. Yang#, S. Yang, Z. Shi, M. Tang, S. Liu, Y. Li, J. Li, D. Zhang, X. Su, C. Shih, Y. Sun, J. J. Wilson, X. Zhou* and A. Zhang*. 2020. Using high-throughput sequencing and DNA barcoding to infer community assembly for speciose taxonomic groups: a case study. Evolutionary Ecology PDF

  7. 韩本凤,周欣,张雪*。2020。基因组学技术在病毒鉴定与宿主溯源中的应用。生物多样性 28(5): 587-595。PDF

  8. Kohli*, M., H. Letsch*, C. Greve, O. Béthoux, I. Deregnaucourt, S. Liu, X. Zhou, A. Donath, C. Mayer, L. Podsiadlowski, R. Machida, O. Niehuis, J. Rust, T. Wappler, X. Yu, B. Misof, and J. Ware. 2020. How old are dragonflies and damselflies? Odonata (Insecta) transcriptomics resolve familial relationships. preprint. PDF

  9. Legeai, F.#, B. F. Santos#, S. Robin#, A. Bretaudeau, R. B. Dikow, C. Lemaitre, V. Jouan, M. Ravallec, J.-M. Drezen, D. Tagu, G. Gyapay, X. Zhou, S. Liu, B. A. Webb, S. G. Brady, and A.-N. Volkoff*. 2020. Genomic architecture of endogenous ichnoviruses reveals distinct evolutionary pathways leading to virus domestication in parasitic wasps. BMC Biology 18: 89. PDF

  10. Rispe#*, C., F. Legeai#*, A. K Arora, P. Baa-Puyoulet, M. Barberà, M. Bouallègue, A. Bretaudeau, J. A. Brisson, F. Calevro, P. Capy, O. Catrice, T. Chertemps, C. Couture, A. E. Douglas, K. Dufault-Thompson, P. Escuer, H. Feng, R. Fernández, T. Gabaldón, GenoTOOL platform, R. Guigó, F. Hilliou, S. Hinojosa, Y. Hsiao, S. Hudaverdian, E. Jacquin-Joly, E. James, S. Johnston, B. Joubard, G. Le Goff, G. Le Trionnaire, S. Liu, H. Lu, M. Maïbèche, D. Martínez-Torres, N. Montagné, N. Moran, M. Makni, M. Marcet-Houben, C. Meslin, P. Nabity, D. Papura, N. Parisot, Y. Rahbé, S. Robin, P. Roux, J. Rozas, A. Ripoll, A. Sánchez-Gracia, J. F. Sánchez-Herrero, D. Santesmasses, M. Tang, K. Thompson, W. Tian, M. van Munster, J. Wemmer, A. C. Wilson, Y. Zhang, C. Zhao, J. Zhao, S. Zhao, X. Zhou, International Aphid Genomics Consortium, F. Delmotte*, and D. Tagu*. 2020. The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest. BMC Biology 18: 90.  PDF Correction

  11. Wang, X.#, J. Huang#, P. Wang#, R. Wang, C. Wang, D. Yu, C. Ke, T. Huang, Y. Song, J. Bai, K. Li, L. Ren, M. Rob, H. Han*, X. Zhou*, and Y. Zhao*. 2020. Analysis of the Chinese alligator TCRα/δ loci reveals the evolutionary pattern of atypical TCRδ/TCRμ in tetrapod. Journal of Immunology 205(3): 637-647. PDF

  12. Vasilikopoulos, A. #*, B. Misof #*, K. Meusemann, D. Lieberz, T. Flouri, R. G. Beutel, O. Niehuis, T. Wappler, J. Rust, R. S. Peters, A. Donath, L. Podsiadlowski, C. Mayer, D. Bartel, A. Böhm, S. Liu, P. Kapli, C. Greve, J. E. Jepson, X. Liu, X. Zhou, H. Aspöck, and U. Aspöck. 2020. An integrative phylogenomic approach to elucidate the evolutionary history and divergence times of Neuropterida (Insecta: Holometabola). BMC Evolutionary Biology​ 20: 64. PDF Correction

  13. Zhang, W.#, X. Zhang#, Q. Su, M. Tang, H. Zheng, and X. Zhou*. 2020. Genomic features underlying evolutionary transitions of Apibacter to honeybee gut symbionts. preprint PDF

  14. Zhang, S., S. Shen, J. Peng, X. Zhou, X. Kong, P. Ren, F. Liu, L. Han*, S. Zhan*, Y. Huang*, A. Zhang*, and Z. Zhang*. 2020. Chromosome-level genome assembly of an important pine defoliator, Dendrolimus punctatus (Lepidoptera; Lasiocampidae). Molecular Ecology Resources 20(4): 1023-1037. PDF

  15. Hao, M.#, Q. Jin#, G. Meng#, C. Yang#, S. Yang, Z. Shi, M. Tang, S. Liu, Y. Li, D. Zhang, X. Su, C. Shih, Y. Sun, X. Zhou*, and A. Zhang*. 2020. Regional assemblages shaped by historical and contemporary factors: evidence from a species-rich insect group. Molecular Ecology 29(13): 2492-2510. PDF
    Molecular Ecology Perspective

  16. Zhang, Z., M. Huang, L. Qiu, R. Song, Z. Zhang, Y. Ding, X. Zhou, X. Zhang*, and H. Zheng*. 2020. Diversity and functional analysis of Chinese bumblebee gut microbiota reveal the metabolic niche and antibiotic resistance variation of GilliamellaInsect SciencePDF

  17. Thomas, J. A., P. B. Frandsen, E. Prendini, X. Zhou, and R. Holzenthal*. 2020. A multigene phylogeny and timeline for Trichoptera (Insecta). Systematic Entomology 45(3): 670-686. PDF

  18. Wipfler, B., W. Koehler, P. Frandsen, A. Donath, S. Liu, R. Machida, B. Misof, R. Peters, S. Shimzu, X. Zhou, and S. Simon. 2020. Phylogenomics changes our understanding about earwig evolution. Systematic Entomology 45(3): 516-526. PDF

  19. Wang, J., Q. Su, X. Zhang*, C. Li, S. Luo, X. Zhou, and H. Zheng*. 2020. Entomomonas moraniae gen. nov. sp. nov., a member of the Pseudomonadacea family isolated from the Asian honey bee gut possesses a highly reduced genome. International Journal of Systematic and Evolutionary Microbiology 70(1): 165-171. PDF

  20. Shelomi, M.*, B. Wipfler, X. Zhou, and Y. Pauchet. 2020. Multifunctional cellulase enzymes are ancestral in Polyneoptera. Insect Molecular Biology ​29 (1): 124-135. PDF

© 2020 by Xin Zhou

The Zhou lab, China Agricultural University